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Although deer mice (Peromyscus spp.) are among the most studied small mammals, their species diversity and phylogenetic relationships remain unclear. The lack of taxonomic clarity is mainly due to a conservative morphology and because some taxa are rare, have restricted distributions, or are poorly sampled. One taxon, P. mexicanus, includes southern Mexican subspecies that have not had their systematic placement tested with genetic data. We analyzed the phylogenetic relationships and genetic structure of P. mexicanus populations using sequences of the mitochondrial gene cytochrome b. We inferred that P. mexicanus is paraphyletic, with P. m. teapensis, P. m. tehuantepecus, andP. m. totontepecus more closely related to P. gymnotis than to P. m. mexicanus. This highly divergent clade ranges from northeastern Oaxaca to northern Chiapas, including southern Veracruz, and southern Tabasco. In light of this group’s mitochondrial distinctiveness, cohesive geographic range, and previously reported molecular, biochemical, and morphological differences, we recommend it be treated as P. totontepecus. Our findings demonstrate the need for an improved understanding of the diversity and evolutionary history of these common and abundant members of North American small mammal communities.more » « less
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Abstract Deer mice (genus Peromyscus ) are among the commonest small mammals in the Nearctic zoogeographic region. Nevertheless, systematic relationships are only partially settled and numerous taxonomic questions await resolution. For instance, researchers have found that some members of the Peromyscus truei species group contain high levels of genetic divergence that could indicate the presence of cryptic species. We analyzed the systematics and phylogenetic relationships of the P. truei group using new and previously published mitochondrial cytochrome b sequences. Our analyses verify several earlier conclusions, but we also detected new clades that deserve recognition. Considering their mitochondrial distinctiveness, allopatric ranges, and previously reported molecular, biochemical, chromosomal, morphological, and ecological differences, we elevate three previously described taxa to species. We support the recognition of two subgroupings. The first comprises P. gratus , P. truei , and possibly P. cf. martirensis and P. cf. zapotecae . The second contains to P. amplus , P. attwateri , P. collinus , P. difficilis , P. felipensis , P. laceianus , P. nasutus , P. ochraventer , and P. pectoralis. Placement of P. bullatus will likely remain unknown until genetic data are available. Further research could improve our understanding of the evolutionary history of Peromyscus , but in some cases taxonomic issues must be resolved first.more » « less
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